Roslin Bioinformatics - Genotype Checker
Saving Reports
The current message displyed in the 'Message Tab' can be printed
using the 'Print Message' button or from the 'Report' menu.
The 'Save Report' button or 'Report' menu item exports a set of
HTML reports on the Pedigree and Genotype data to a location of choice.
- BadGenotypesByIndividual.html
- BadGenotypesByMarker.html
- BadIndividuals.html
- BadMarkers.html
- FullInferenceReport.html
- Individuals.html
- InferredIndividualsSummary.html
- InferredMarkersSummary.html
- MarkersAndAlleles.html
- ParsingErrors.html
- currentMessagePane.html
Saving Cleaned Genotype Data
After problematic datapoints have been identified and masked, a clean copy of the genotype data file can be saved from which all masked datapoints have been removed (i.e. all masked individuals, markers or specific genotypes). A log file recording the deleted information is also generated. Saving of the cleaned genotype file is performed by selecting 'Save Masked Genotype File' under the 'Report' menu. This feature enables clean datasets to be generated for any downstream processing applications.